Bio-Modeling Projects
- Modeling and Visualization Tools
| Tools | Structure-functions | Group: |
TexMol (PDB -> BEM | FEM | FDM) Input Data(1jj2.pdb) |
Molecular Models Energetic, Drug Modeling |
Patrick Christmas Andrew Gillette |
LBIE-Mol (Image/Model -> BEM/FEM) Input Data(1JJ2.rawiv) |
Electrostatic Active Site |
Bongjune Kwon Will Willard |
VolRover (2D/3D -> FEM | FDM) Input Data(groel_2A.rawiv) |
Reconstruction Anisotropic Diffusion |
Jesse Sweet Johnny Wu |
LBIE (Image/Model -> BEM/FEM) Input Data(heart.rawiv) |
Meshes, Drift & Diffusion |
Andrea Hawkins Jesse Windle |
Tracing/Tiling/Tetra Tools (Cross sectional image stacks -> Linear BEM | FEM) Surface Reconstruction and Medial Axis from Point Cloud(tcocone) Geometry Segmentation from Point Cloud (seg) Input Data(freddy.raw) |
Meshes, Stokes Deformation |
Priyanka Godbole Mason Weems |
PRISM (Cloud of Points, Piecewise Linear Model -> Spline BEM | FEM) Input Data(knee.raw) |
A-patch/B-spline Acoustic Scattering |
Richard Darst Inwoo Ha |